The detailed information of tRNA gene sequence


Sequence ID>W11135647
Genome IDAEFH01000055
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema phagedenis F0421 [AEFH]
Start position on genome 90
End posion on genome 165
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
atcaaccaat
tRNA gene sequence 
CGGGATGTAGCCTAGTGGCTAAGGCGTCTGGTTTGGGACCAGAAGATCGGGGGTTCAAAT
CCCTCCATCCCGACCT
Downstream region at tRNA end position 
tgaagtgttg
Secondary structure (Cloverleaf model)
>W11135647	Pro	TGG
                   t      ACCT tgaagtgttg
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    G       T C C G       G G G G G     C
    G       | | | |                 T T
    C       A G G C
      T A          G     AGATC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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