The detailed information of tRNA gene sequence


Sequence ID>W11135650
Genome IDAEFH01000068
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema phagedenis F0421 [AEFH]
Start position on genome 5933
End posion on genome 5861
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taccagacgc
tRNA gene sequence 
CGCAGGGTAGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGGAGGTCAGAGGTTCAAGT
CCTCTCCCTGCTAtaa
Downstream region at tRNA end position 
aagcattgtt
Secondary structure (Cloverleaf model)
>W11135650	Met	CAT
                   c      Ataa aagcattgtt
                     C   T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     T C T C C     A
      T G A        A      | | | | |     A
    T       C G A G       A G A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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