The detailed information of tRNA gene sequence


Sequence ID>W11135673
Genome IDAEFH01000196
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema phagedenis F0421 [AEFH]
Start position on genome 6179
End posion on genome 6251
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
acattgttac
tRNA gene sequence 
GGGCTATTAGCTCAGTAGGTAGAGCAACGCCCTTTTAAGGCGTGGGTCGATGGTTCGAAT
CCATCATAGCTCAgcg
Downstream region at tRNA end position 
acagggaaca
Secondary structure (Cloverleaf model)
>W11135673	Lys	TTT
                   c      Agcg acagggaaca
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T
                     T - A          T A
                    T     C T A C C     A
      T G A        A      | | | | |     G
    A       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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