The detailed information of tRNA gene sequence


Sequence ID>W11135680
Genome IDAEFH01000270
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema phagedenis F0421 [AEFH]
Start position on genome 36460
End posion on genome 36531
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ggtaataagc
tRNA gene sequence 
GGACGATTAACTCAGTGGTAGAGTGCTACCTTCACACGGTAGAAGTCATCGGTTCAAACC
CGGTATCGTCCAttt
Downstream region at tRNA end position 
tctaatttaa
Secondary structure (Cloverleaf model)
>W11135680	Val	CAC
                   c      Attt tctaatttaa
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     A - T
                     T - A          C A
                    T     T G G C C     A
        G A        A      | + | | |     A
      T     C T C A       A T C G G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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