The detailed information of tRNA gene sequence


Sequence ID>W1510326469
Genome IDCLIT01000006
Search identical group
Phylum/ClassFirmicutes
SpeciesStreptococcus pneumoniae SMRU2508 [CLIT] SMRU2508 [CLIT]
Start position on genome 11850
End posion on genome 11760
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agtaagtatT
tRNA gene sequence 
GGAAGATTACTCAAGAGGCTTAAGAGGCCGTGTTGGAAACGCGGTAGGCGTGTAATAGCG
TGCGTGGGTTCGAATCCCATGTCTTCCGTCg
Downstream region at tRNA end position 
aaaaaagatt
Secondary structure (Cloverleaf model)
>W1510326469	Ser	GGA
                   T      GTCg aaaaaagatt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T + G          T A
                    T     T A C C C     A
      A G A        A      + | | | |     G
    G       A C T C       G T G G G     C
    G         | | |                 T T
    C       A G A G
      T T A        G     TAGGCGTGTAATAGCGTGC
                    C - G
                    C - G
                    G - C
                    T + G
                    G - C
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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