The detailed information of tRNA gene sequence


Sequence ID>W1511507405
Genome IDJXNO01000091
Search identical group
Phylum/ClassSpirochaetota
SpeciesBrachyspira hyodysenteriae ST195 [JXNO]
Start position on genome 47886
End posion on genome 47800
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atatagttat
tRNA gene sequence 
GGAGAGATGCCCGAGAGGCCGAAGGGAGCAGTTTGCTAAACTGTCGTAGGTATCCCCTAC
CGCGGGTTCGAATCCCGCTCTCTCCGCat
Downstream region at tRNA end position 
cggtttatat
Secondary structure (Cloverleaf model)
>W1511507405	Ser	GCT
                   t      GCat cggtttatat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      A G A        G      | | | | |     G
    G       G C C C       G C G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        A     CGTAGGTATCCCCTACC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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