The detailed information of tRNA gene sequence


Sequence ID>W11138587
Genome IDAEIU01000123
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio caribbeanicus ATCC BAA-2122 [AEIU]
Start position on genome 4036
End posion on genome 3950
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tttatagcgt
tRNA gene sequence 
GCCCTGGTGGTGGAATTGGTAGACACAAGGGATTTAAAATCCCTCGGCGTTCGCGCTGTG
CCGGTTCAAGTCCGGCCCGGGGCACCA
Downstream region at tRNA end position 
tctctcttgc
Secondary structure (Cloverleaf model)
>W11138587	Leu	TAA
                   t      ACCA tctctcttgc
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | | | |     A
    T       G G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGGCGTTCGCGCTGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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