The detailed information of tRNA gene sequence


Sequence ID>W11138605
Genome IDAEIV01000002
Search identical group
Phylum/ClassSynergistota
SpeciesAminomonas paucivorans DSM 12260 [AEIV]
Start position on genome 42840
End posion on genome 42936
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atgcagtttc
tRNA gene sequence 
GGAGGCGAGTCGTGGCTGGTGCTGCGTCCGGGCTTCAAACCCGGTGGGAGTCGGTTCAGC
CGGCTCCGGTGGGTTCGATTCCCACACGCCTCCGCCA
Downstream region at tRNA end position 
ttctgcccct
Secondary structure (Cloverleaf model)
>W11138605	SeC	TCA
                   c      GCCA ttctgcccct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     A   A          T T
                    G     C A C C C     A
      T C G        T      | | | | |     G
    G       G T G C       G T G G G     C
    G       + + | |                 T T
    T       T G C G
      G C          T     TGGGAGTCGGTTCAGCCGGCTCCG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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