The detailed information of tRNA gene sequence


Sequence ID>W1511512610
Genome IDJXUO01000249
Search identical group
Phylum/ClassCyanobacteriota
SpeciesCandidatus Synechococcus spongiarum spongiarum 142 [JXUO]
Start position on genome 6676
End posion on genome 6763
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgtctccctt
tRNA gene sequence 
GGAGAGGTGGCAGAGTCCGGTTGATTGCGCACGACTCGAAATCGTGTAGGGCCAAAACCC
TCGTGGGTTCGAATCCCACCCTCTCCGCtt
Downstream region at tRNA end position 
tatttggaaa
Secondary structure (Cloverleaf model)
>W1511512610	Ser	CGA
                   t      GCtt tatttggaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  C         G A C G       G T G G G     C
  G         + | | |                 T T
  G         T T G C
    T T G A        G     TAGGGCCAAAACCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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