The detailed information of tRNA gene sequence


Sequence ID>W11139114
Genome IDAEJP01000052
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAggregatibacter actinomycetemcomitans serotype b str. SCC1398 [AEJP]
Start position on genome 17874
End posion on genome 17785
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctcaaacctc
tRNA gene sequence 
GGAGGAATGGTCGAGCGGTTGAAGGCACCGGTCTTGAAAACCGGCGAGGGTTTACACCCT
CCCTGGGTTCGAATCCCAGTTCCTCCGCCA
Downstream region at tRNA end position 
tattcataaa
Secondary structure (Cloverleaf model)
>W11139114	Ser	TGA
                   c      GCCA tattcataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     G A C C C     A
      C G A        G      | | | | |     G
    G       G C T G       C T G G G     C
    G         | + |                 T T
    T       A G G C
      T G A        A     CGAGGGTTTACACCCTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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