The detailed information of tRNA gene sequence


Sequence ID>W11139491
Genome IDAEKD01000073
Search identical group
Phylum/ClassBacillota
SpeciesCaldicellulosiruptor acetigenus 6A [AEKD]
Start position on genome 2299
End posion on genome 2374
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caccagatgt
tRNA gene sequence 
CGCGGGGTGGAGCAGCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGGAGGTTCAAAT
CCTCCCCCCGCAACCA
Downstream region at tRNA end position 
aaaattttaa
Secondary structure (Cloverleaf model)
>W11139491	Met	CAT
                   t      ACCA aaaattttaa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C T C C     A
      C G A        G      | | | | |     A
    T       C G A G       G G A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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