The detailed information of tRNA gene sequence


Sequence ID>W1511517279
Genome IDJXXE01000612
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodopseudomonas palustris BAL398 [JXXE]
Start position on genome 1131
End posion on genome 1038
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gggccgtgct
tRNA gene sequence 
GGAGATGTGGCCGAGTGGCTGAAGGCGGCGGTTTGCTAAACCGTTATAGGGTTGTAAAGC
CCTATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
gccccctgct
Secondary structure (Cloverleaf model)
>W1511517279	Ser	GCT
                   t      GCCA gccccctgct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T + G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGGTTGTAAAGCCCTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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