The detailed information of tRNA gene sequence


Sequence ID>W1511535296
Genome IDJYON01000010
Search identical group
Phylum/ClassCyanobacteriota
SpeciesAliterella atlantica CENA595 [JYON]
Start position on genome 11777
End posion on genome 11865
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aacccattgT
tRNA gene sequence 
GGAGAAGTGACTGAGAGGCTTATAGTATCTTCCTGCTAAGAAGACACGGTTTAAAACCCG
TCGGGGGTTCAAATCCCCCCTTCTCCGTgc
Downstream region at tRNA end position 
aattagggcg
Secondary structure (Cloverleaf model)
>W1511535296	Ser	GCT
                   T      GTgc aattagggcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C C C C C     A
      A G A        G      | | | | |     A
    G       G T C A       G G G G G     C
    G       + | | |                 T T
    C       T A G T
      T T A        A     CACGGTTTAAAACCCGTC
                    T - A
                    C - G
                    T - A
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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