The detailed information of tRNA gene sequence


Sequence ID>W1511545309
Genome IDJZKI01000043
Search identical group
Phylum/ClassNitrospinota
SpeciesCandidatus Nitromaritima sp. SCGC AAA799-A02 SCGC_AAA799_A02 [JZKI]
Start position on genome 2535
End posion on genome 2444
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttaatataac
tRNA gene sequence 
GGAGAGGTGGCCGAGCTGGCTTAAGGCGCACGCCTGCTAAGTGTGTGTAGGCTTATCCCC
TACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
caatatttca
Secondary structure (Cloverleaf model)
>W1511545309	Ser	GCT
                   c      GCCA caatatttca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T T A          G     TGTAGGCTTATCCCCTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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