The detailed information of tRNA gene sequence


Sequence ID>W1511563990
Genome IDLACN01000006
Search identical group
Phylum/ClassBacillota
SpeciesCaldicellulosiruptor naganoensis NA10 [LACN]
Start position on genome 1261624
End posion on genome 1261548
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
atgctgatgg
tRNA gene sequence 
CGGGGTGTAGCTCAGCTTGGTAGAGCACGTGGTTTGGGACCATGGGGCCGGAGGTTCAAG
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
tgagaagtaa
Secondary structure (Cloverleaf model)
>W1511563990	Pro	TGG
                   g      ACCA tgagaagtaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T C T C C     A
      C G A        A      + | | | |     A
    T       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCC
                    C - G
                    G + T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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