The detailed information of tRNA gene sequence


Sequence ID>W1511565023
Genome IDLAEM01000095
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae O1 biovar El Tor M1429 [LAEM]
Start position on genome 147
End posion on genome 223
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tacccagact
tRNA gene sequence 
CGGGGCGTAGCTCAGCCTGGTAGAGTACTGCGTTCGGGACGCAGGAGTCGGAGGTTCGAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tcttttgatg
Secondary structure (Cloverleaf model)
>W1511565023	Pro	CGG
                   t      ACCA tcttttgatg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | +                 T T
    G       G A G T
      G T A        A     GAGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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