The detailed information of tRNA gene sequence


Sequence ID>W1511574132
Genome IDLANM01000127
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi str. Karp [LANM]
Start position on genome 1287
End posion on genome 1211
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ataaaatagt
tRNA gene sequence 
GGGTTTGTAGCTCAGCTGGTTAGAGCACACGTCTGATAAACGTGAGGTCGGAAGTTCAAG
TCTTCTCAAGCCCACCA
Downstream region at tRNA end position 
tctatttaga
Secondary structure (Cloverleaf model)
>W1511574132	Ile	GAT
                   t      ACCA tctatttaga
                     G - C
                     G - C
                     G - C
                     T + G
                     T - A
                     T - A
                     G - C          T G
                    T     T C T T C     A
      C G A        A      + | | | |     A
    T       C T C G       G G A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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