The detailed information of tRNA gene sequence


Sequence ID>W1511596317
Genome IDLBOC01000002
Search identical group
Phylum/ClassUnclassified
Speciescandidate division TM6 bacterium GW2011_GWE2_31_21 [LBOC]
Start position on genome 6346
End posion on genome 6254
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gacgtttttt
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGAAAGCGACCGCCTCGAAAGCGGTTATTCTGGGAAATCTG
GAATCGTGGGTTCGAATCCCACTCTCTCCACCA
Downstream region at tRNA end position 
aattttcaca
Secondary structure (Cloverleaf model)
>W1511596317	Ser	CGA
                   t      ACCA aattttcaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TATTCTGGGAAATCTGGAATC
                    A - T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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