The detailed information of tRNA gene sequence


Sequence ID>W1511597130
Genome IDLBPE01000002
Search identical group
Phylum/ClassUnclassified
Speciescandidate division TM6 bacterium GW2011_GWF2_33_332 [LBPE]
Start position on genome 57232
End posion on genome 57323
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttttggcgc
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGAAAGCGCGTGCCTGCTAAGTGCGTATACGGAGAAATCTG
TATCGAGGGTTCGAATCCCTCTCTCTCCACCA
Downstream region at tRNA end position 
tattttactg
Secondary structure (Cloverleaf model)
>W1511597130	Ser	GCT
                   c      ACCA tattttactg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TATACGGAGAAATCTGTATC
                    C - G
                    G - C
                    T + G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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