The detailed information of tRNA gene sequence


Sequence ID>W1511597139
Genome IDLBPE01000004
Search identical group
Phylum/ClassUnclassified
Speciescandidate division TM6 bacterium GW2011_GWF2_33_332 [LBPE]
Start position on genome 242917
End posion on genome 243008
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatttaccgt
tRNA gene sequence 
GGAGAGATGGCCGAGTGGCTGAAGGCGCACGATTGGAAATCTTGTATGCATCGAAAGGTG
CATCGAGGGTTCGAATCCCTCTCTCTCCACCA
Downstream region at tRNA end position 
gaaaattggg
Secondary structure (Cloverleaf model)
>W1511597139	Ser	GGA
                   t      ACCA gaaaattggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGCATCGAAAGGTGCATC
                    C - G
                    A - T
                    C   T
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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