The detailed information of tRNA gene sequence


Sequence ID>W1511599511
Genome IDLBSM01000002
Search identical group
Phylum/ClassUnclassified
SpeciesBerkelbacteria bacterium GW2011_GWA1_36_9 [LBSM]
Start position on genome 71516
End posion on genome 71428
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtgtttgtaT
tRNA gene sequence 
GGAAGGGTCGCATAGCGGACTAGTGCGCCTGTCTTGAAAACAGGTGATCATGCAAGTGAT
CCGTGAGTTCGAATCTCACCCCTTCCGTat
Downstream region at tRNA end position 
attttgggta
Secondary structure (Cloverleaf model)
>W1511599511	Ser	TGA
                   T      GTat attttgggta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C T C     A
      C G A        C      | | | | |     G
    G       T A C G       G T G A G     C
    G       + | | |                 T T
    A       G T G C
      C T A        G     TGATCATGCAAGTGATCC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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