The detailed information of tRNA gene sequence


Sequence ID>W1511599906
Genome IDLBSX01000009
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Magasanikbacteria bacterium GW2011_GWC2_37_14 bacterium GW2011_GWC2_37_14 [LBSX]
Start position on genome 21558
End posion on genome 21472
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acgttaattt
tRNA gene sequence 
GGAGAGTTCGCATAGTTGGTCTAGTGCGCATGCTTGGAAAGCATGTATACCGAAAGGTAT
CGAGGGTTCGAATCCCTCACTCTCCGCtc
Downstream region at tRNA end position 
tggccaccgg
Secondary structure (Cloverleaf model)
>W1511599906	Ser	GGA
                   t      GCtc tggccaccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       G A G G G     C
  G         + | | |                 T T
  T         G T G C
    C T A          G     TATACCGAAAGGTATC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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