The detailed information of tRNA gene sequence


Sequence ID>W1511601213
Genome IDLBUO01000027
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Shapirobacteria bacterium GW2011_GWF1_38_23 bacterium GW2011_GWF1_38_23 [LBUO]
Start position on genome 1842
End posion on genome 1916
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttttgtttt
tRNA gene sequence 
AGGAACGTAGTTTAATTGGTAAAACGCTCGTCTCCAGAACAAGTAATAAGAGTTCAACTC
TCTTCGTTCCTGCAA
Downstream region at tRNA end position 
aatcccctat
Secondary structure (Cloverleaf model)
>W1511601213	Trp	CCA
                   t      GCAA aatcccctat
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     G - C          T C
                    T     T T C T C     A
      T A A        A      | | | | |     A
    T       T T T G       A A G A G     C
    G       | | | |                 T T
    G       A A A C
      T A          G     TAAT
                    C - G
                    T - A
                    C   A
                    G - C
                    T - A
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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