The detailed information of tRNA gene sequence


Sequence ID>W1511601797
Genome IDLBVK01000006
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWB1_38_8 GW2011_GWB1_38_8 [LBVK]
Start position on genome 18120
End posion on genome 18031
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgaaatatat
tRNA gene sequence 
GGAAGAGTGGCTGAGTGGTTGAAGGCACCGGTTTCGAAAACCGGCATAGGCGCAAGCCTA
TCGTGAGTTCAAATCTCACCTCTTCCGCCT
Downstream region at tRNA end position 
tcgcctcgca
Secondary structure (Cloverleaf model)
>W1511601797	Ser	CGA
                   t      GCCT tcgcctcgca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     A
    G       G T C G       G T G A G     C
    G         + | |                 T T
    T       A G G C
      T G A        A     CATAGGCGCAAGCCTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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