The detailed information of tRNA gene sequence


Sequence ID>W1511602012
Genome IDLBVR01000009
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Shapirobacteria bacterium GW2011_GWE1_38_92 bacterium GW2011_GWE1_38_92 [LBVR]
Start position on genome 11588
End posion on genome 11662
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttctttacgc
tRNA gene sequence 
GGCAGGGTAGCTCAATTGGTTAGAGCACAGCATTCATAACGCTGAGGTCGCGGGTTCAAG
TCCCGCCCCTGCTACtt
Downstream region at tRNA end position 
aaaaatttgg
Secondary structure (Cloverleaf model)
>W1511602012	Met	CAT
                   c      ACtt aaaaatttgg
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
      T A A        A      | | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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