The detailed information of tRNA gene sequence


Sequence ID>W1511605867
Genome IDLCAT01000009
Search identical group
Phylum/ClassUnclassified
Speciescandidate division TM6 bacterium GW2011_GWE2_41_16 [LCAT]
Start position on genome 11267
End posion on genome 11175
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgtgacgcat
tRNA gene sequence 
GGAGAGATGGCTGAGCGGTCGATAGCGGCGGTCTTGAAAACCGTTATCTCGTCAAAAACG
GGATCGGGGGTTCGAATCCCCCTCTCTCCTCCA
Downstream region at tRNA end position 
ttttatagcg
Secondary structure (Cloverleaf model)
>W1511605867	Ser	TGA
                   t      TCCA ttttatagcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G G G G G     C
    G       + | | |                 T T
    T       T A G C
      C G A        G     TATCTCGTCAAAAACGGGATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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