The detailed information of tRNA gene sequence


Sequence ID>W1511605928
Genome IDLCAV01000006
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Magasanikbacteria bacterium GW2011_GWC2_41_17 bacterium GW2011_GWC2_41_17 [LCAV]
Start position on genome 18864
End posion on genome 18781
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
aaaggataaa
tRNA gene sequence 
GCCGCGGTGGCGGAATTGGCAGACGCACGGGACTCAAAATCCCGCGACCGCAAGGTCATG
AGAGTTCGATTCTCTCCCGCGGCAttt
Downstream region at tRNA end position 
tcacatgtat
Secondary structure (Cloverleaf model)
>W1511605928	Leu	CAA
                   a      Attt tcacatgtat
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T T
                    T     C T C T C     A
      T A A        G      | | | | |     G
    T       G G C G       G A G A G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGACCGCAAGGTCAT
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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