The detailed information of tRNA gene sequence


Sequence ID>W1511605953
Genome IDLCAV01000041
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Magasanikbacteria bacterium GW2011_GWC2_41_17 bacterium GW2011_GWC2_41_17 [LCAV]
Start position on genome 1826
End posion on genome 1900
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tatttccatt
tRNA gene sequence 
GGCCTCATCGTCTAATGGTTAGGACACCAGGTTTTCATCCTGGTAATCGGGGTTCGATTC
CCCGTGGGGCTACCA
Downstream region at tRNA end position 
aaatccgaca
Secondary structure (Cloverleaf model)
>W1511605953	Glu	TTC
                   t      ACCA aaatccgaca
                     G + T
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     A - T          T T
                    T     G C C C C     A
      T A A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     TAAT
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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