The detailed information of tRNA gene sequence


Sequence ID>W1511606791
Genome IDLCBY01000004
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Roizmanbacteria bacterium GW2011_GWC2_41_7 bacterium GW2011_GWC2_41_7 [LCBY]
Start position on genome 2308
End posion on genome 2219
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aagcgaactc
tRNA gene sequence 
GGAGGCGTGCCGGAGCGGACGATCGGGCTTGTCTTGAAAACAAGTATAGTCGCAAGGCTA
TCAGAGGTTCGAATCCTCTCGCCTCCGCAA
Downstream region at tRNA end position 
actgccttca
Secondary structure (Cloverleaf model)
>W1511606791	Ser	TGA
                   c      GCAA actgccttca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        G      | | | | |     G
    G       G G C C       A G A G G     C
    G       + | | |                 T T
    A       T C G G
      C G A        G     TATAGTCGCAAGGCTATC
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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