The detailed information of tRNA gene sequence


Sequence ID>W1511607129
Genome IDLCCI01000006
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWC1_42_11 GW2011_GWC1_42_11 [LCCI]
Start position on genome 53823
End posion on genome 53912
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gggcagacag
tRNA gene sequence 
GGATAGGTGGCTGAGTGGTCTAAGGCAGCGGTCTTGAAAACCGTCGTCCTCGAAAGTGGA
CCGTGAGTTCGAATCTCACCCTATCCGCAA
Downstream region at tRNA end position 
aagtaaaaag
Secondary structure (Cloverleaf model)
>W1511607129	Ser	TGA
                   g      GCAA aagtaaaaag
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G A G     C
    G         + | |                 T T
    T       A G G C
      C T A        A     CGTCCTCGAAAGTGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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