The detailed information of tRNA gene sequence


Sequence ID>W1511607280
Genome IDLCCN01000005
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Amesbacteria bacterium GW2011_GWA2_42_12 bacterium GW2011_GWA2_42_12 [LCCN]
Start position on genome 33867
End posion on genome 33780
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taggcaaatt
tRNA gene sequence 
GGAGAGGTCGCATAGCGGTCTAGTGCGCGGCTTTGGAGAAGCCGTGTGGGCGCAAGCTCA
CCGGGGGTTCAAATCCCCCCCTCTCCGCtt
Downstream region at tRNA end position 
tcacctcgcc
Secondary structure (Cloverleaf model)
>W1511607280	Ser	GGA
                   t      GCtt tcacctcgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        C      | | | | |     A
    G       T A C G       G G G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TGTGGGCGCAAGCTCACC
                    C - G
                    G - C
                    G - C
                    C - G
                    T - A
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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