The detailed information of tRNA gene sequence


Sequence ID>W1511607373
Genome IDLCCQ01000008
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWC2_42_13 GW2011_GWC2_42_13 [LCCQ]
Start position on genome 13744
End posion on genome 13655
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaaacaaagt
tRNA gene sequence 
GGAGGGGTGGCTGAGTGGCTGAAAGCAGCGCCCTGCTAAGGCGTTATACCTCTAACAGGG
TATCGAGAGTTCGAATCTCTCCCCCTCCGCat
Downstream region at tRNA end position 
gactcaattt
Secondary structure (Cloverleaf model)
>W1511607373	Ser	GCT
                   t      GCat gactcaattt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G A G     C
    G         | | |                 T T
    C       A A G C
      T G A        A     TATACCTCTAACAGGGTATC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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