The detailed information of tRNA gene sequence


Sequence ID>W1511607396
Genome IDLCCQ01000026
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWC2_42_13 GW2011_GWC2_42_13 [LCCQ]
Start position on genome 3365
End posion on genome 3454
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taatttttaa
tRNA gene sequence 
GGAAGCGTGCCAGAGCGGTTGAATGGGCCGCACTCGAAATGCGGTATGCCCGAAAGGGCA
TCGGAGGTTCGAATCCTCCCGCTTCCGCCA
Downstream region at tRNA end position 
attttcagaa
Secondary structure (Cloverleaf model)
>W1511607396	Ser	CGA
                   a      GCCA attttcagaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C C T C C     A
      C G A        G      | | | | |     G
    G       G A C C       G G A G G     C
    G         | | |                 T T
    T       A T G G
      T G A        G     TATGCCCGAAAGGGCATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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