The detailed information of tRNA gene sequence


Sequence ID>W1511607433
Genome IDLCCS01000004
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWD2_42_14 GW2011_GWD2_42_14 [LCCS]
Start position on genome 27387
End posion on genome 27300
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatgttttag
tRNA gene sequence 
GGAGGCGTCGCATAGTGGTCTAGTGCACCGTCTTGGAAAGGCGGCAAGGTGAAAGCCTTC
GAGGGTTCAAATCCCTCCGCCTCCGCCT
Downstream region at tRNA end position 
gagataatat
Secondary structure (Cloverleaf model)
>W1511607433	Ser	GGA
                   g      GCCT gagataatat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        A     CAAGGTGAAAGCCTTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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