The detailed information of tRNA gene sequence


Sequence ID>W1511607845
Genome IDLCDF01000033
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Giovannonibacteria bacterium GW2011_GWF2_42_19 bacterium GW2011_GWF2_42_19 [LCDF]
Start position on genome 1111
End posion on genome 1022
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttttgtttt
tRNA gene sequence 
GGAGAGGTCGCATAGTGGCCTAGTGCGCTCGCTTGGAAAGCGAGTAAGGGGTCAAACCCT
TCGCGAGTTCGAATCTCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gaattgaaaa
Secondary structure (Cloverleaf model)
>W1511607845	Ser	GGA
                   t      GCCA gaattgaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C T C     A
      T G A        C      | | | | |     G
    G       T A C G       G C G A G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TAAGGGGTCAAACCCTTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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