The detailed information of tRNA gene sequence


Sequence ID>W1511607851
Genome IDLCDF01000040
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Giovannonibacteria bacterium GW2011_GWF2_42_19 bacterium GW2011_GWF2_42_19 [LCDF]
Start position on genome 5374
End posion on genome 5464
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caataatccg
tRNA gene sequence 
GGAGGAGTCGCATAGAGGCCTAGTGCGGCACGGTGCTAACGTGCTTAGGGTCAAAAGCCC
TTCGTGGGTTCGAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
gaaaacgaaa
Secondary structure (Cloverleaf model)
>W1511607851	Ser	GCT
                   g      GCCA gaaaacgaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      A G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TTAGGGTCAAAAGCCCTTC
                    G - C
                    C - G
                    A - T
                    C - G
                    G - C
                  G       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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