The detailed information of tRNA gene sequence


Sequence ID>W1511608085
Genome IDLCDM01000001
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Magasanikbacteria bacterium GW2011_GWC2_42_27 bacterium GW2011_GWC2_42_27 [LCDM]
Start position on genome 86380
End posion on genome 86454
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgctttacgt
tRNA gene sequence 
GGATCGGTAGTTCAACTGGTTAGAGCACTGCCCTGTCACGGCAGAAGTTGCGGGTTCGAG
TCCCGTCCGGTCCGCtc
Downstream region at tRNA end position 
aatgtcttag
Secondary structure (Cloverleaf model)
>W1511608085	Asp	GTC
                   t      GCtc aatgtcttag
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      C A A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     AAGTT
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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