The detailed information of tRNA gene sequence


Sequence ID>W1511608091
Genome IDLCDM01000003
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Magasanikbacteria bacterium GW2011_GWC2_42_27 bacterium GW2011_GWC2_42_27 [LCDM]
Start position on genome 109653
End posion on genome 109566
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gatgtaaagt
tRNA gene sequence 
GGAGGGATGGCTGAGCGGTTTAAGGCGGCAGTCTTGAAAACTGTTGTGGATGCAAGTCCA
CCTAGGGTTCGAATCCCTATCCCTCCGCtg
Downstream region at tRNA end position 
tgcatcaaag
Secondary structure (Cloverleaf model)
>W1511608091	Ser	TGA
                   t      GCtg tgcatcaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     A T C C C     A
      C G A        G      | | | | |     G
    G       G T C G       T A G G G     C
    G         + | |                 T T
    T       A G G C
      T T A        G     TGTGGATGCAAGTCCACC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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