The detailed information of tRNA gene sequence


Sequence ID>W1511608092
Genome IDLCDM01000003
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Magasanikbacteria bacterium GW2011_GWC2_42_27 bacterium GW2011_GWC2_42_27 [LCDM]
Start position on genome 109548
End posion on genome 109463
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caaagtatga
tRNA gene sequence 
GGAGAGGTGTCAGAGTGGCCGATCGTGCAGCTTTGCTAAAGCTGTGTACCGCAAGGTACC
GCGGGTTCGAATCCCGCCCTCTCCGCag
Downstream region at tRNA end position 
atgacctttc
Secondary structure (Cloverleaf model)
>W1511608092	Ser	GCT
                   a      GCag atgacctttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G A C T       G C G G G     C
    G       +   |                   T T
    C       T C G T
      C G A        G     TGTACCGCAAGGTACC
                    C - G
                    A - T
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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