The detailed information of tRNA gene sequence


Sequence ID>W1511608105
Genome IDLCDM01000005
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Magasanikbacteria bacterium GW2011_GWC2_42_27 bacterium GW2011_GWC2_42_27 [LCDM]
Start position on genome 164667
End posion on genome 164591
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atggagctac
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGCAGCTCGCCGGGCTCATAACCCGGAGGTCACCGGTTCAAA
TCCGGTCCCCGCAACCA
Downstream region at tRNA end position 
ggcttcatcc
Secondary structure (Cloverleaf model)
>W1511608105	Met	CAT
                   c      ACCA ggcttcatcc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G G C C     A
      T G A        A      | | | | |     A
    C       C G A G       A C C G G     C
    T       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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