The detailed information of tRNA gene sequence


Sequence ID>W1511608119
Genome IDLCDM01000012
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Magasanikbacteria bacterium GW2011_GWC2_42_27 bacterium GW2011_GWC2_42_27 [LCDM]
Start position on genome 5305
End posion on genome 5392
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tccgtgcaat
tRNA gene sequence 
GGAGAGGTGTCAGAGTGGTCGAATGTGCCGCTTTCGAAAAGCGGTGTCTCGCAAGGGACC
GCGGGTTCGAATCCCGCCCTCTCCGCTA
Downstream region at tRNA end position 
aggaattcca
Secondary structure (Cloverleaf model)
>W1511608119	Ser	CGA
                   t      GCTA aggaattcca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G A C T       G C G G G     C
    G         | |                   T T
    T       A T G T
      C G A        G     TGTCTCGCAAGGGACC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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