The detailed information of tRNA gene sequence


Sequence ID>W1511608185
Genome IDLCDO01000038
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Magasanikbacteria bacterium GW2011_GWA2_42_32 bacterium GW2011_GWA2_42_32 [LCDO]
Start position on genome 3187
End posion on genome 3098
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaccgagctt
tRNA gene sequence 
GGAAGGGTCGCATAGTGGTCTAGTGCGGCAGTTTCGAAAACTGCTGTGTCCGCGAGGGCA
CCGTGGGTTCAAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
attttcagaa
Secondary structure (Cloverleaf model)
>W1511608185	Ser	CGA
                   t      GCCA attttcagaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TGTGTCCGCGAGGGCACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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