The detailed information of tRNA gene sequence


Sequence ID>W1511608186
Genome IDLCDO01000040
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Magasanikbacteria bacterium GW2011_GWA2_42_32 bacterium GW2011_GWA2_42_32 [LCDO]
Start position on genome 8863
End posion on genome 8787
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aagaaatagc
tRNA gene sequence 
GGGCTTGTAGCTCAGCTGGCTAGAGCGCTGCATTCGCATTGCAGAGGTCAGGGGTTCGAT
TCCCCTCAAGTCCACCA
Downstream region at tRNA end position 
aaatttgact
Secondary structure (Cloverleaf model)
>W1511608186	Ala	CGC
                   c      ACCA aaatttgact
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     T - A
                     G - C          T T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    A - T
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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