The detailed information of tRNA gene sequence


Sequence ID>W1511608553
Genome IDLCEC01000006
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWB1_42_6 GW2011_GWB1_42_6 [LCEC]
Start position on genome 5200
End posion on genome 5289
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agaactcccc
tRNA gene sequence 
GGAGGCGTGCGTGAGCGGTTGAAACGGACGGTCTTGAAAACCGTTATGCCAGCAATGGCA
TCAGAGGTTCGAATCCTCTCGCCTCCGCCT
Downstream region at tRNA end position 
tcgcctcgca
Secondary structure (Cloverleaf model)
>W1511608553	Ser	TGA
                   c      GCCT tcgcctcgca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        G      | | | | |     G
    G       G T G C       A G A G G     C
    G         | | |                 T T
    T       A A C G
      T G A        G     TATGCCAGCAATGGCATC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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