The detailed information of tRNA gene sequence


Sequence ID>W1511608610
Genome IDLCEE01000026
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWC2_42_6 GW2011_GWC2_42_6 [LCEE]
Start position on genome 2057
End posion on genome 2146
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttttttatat
tRNA gene sequence 
GGAGAGGTGGCTGAGAGGCCGAAAGCGGCAGATTGCTAATCTGTTAGGCGGGTCAAACCG
CCTCGAGGGTTCGAATCCCTCCCTCTCCGCtc
Downstream region at tRNA end position 
attaaatttt
Secondary structure (Cloverleaf model)
>W1511608610	Ser	GCT
                   t      GCtc attaaatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    C       A A G C
      C G A        G     TAGGCGGGTCAAACCGCCTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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