The detailed information of tRNA gene sequence


Sequence ID>W1511608627
Genome IDLCEF01000004
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Collierbacteria bacterium GW2011_GWA1_42_60 bacterium GW2011_GWA1_42_60 [LCEF]
Start position on genome 28638
End posion on genome 28554
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atataggttc
tRNA gene sequence 
GGAGAGTGGGCAGGACGGTAATGCGTTGGTTTTGAAAACCAATGAGCGTAAGCTCTAACA
GGTTCGACCCCTGTACTCTCCGCCT
Downstream region at tRNA end position 
caggaggggt
Secondary structure (Cloverleaf model)
>W1511608627	Ser	TGA
                   c      GCCT caggaggggt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          C C
                    G     T G T C C     A
        A G        G      | | | | |     G
      C     G A C G       A C A G G     C
      G       | | |                 T T
      G     A T G C
        T A        G     TGAGCGTAAGCTCTA
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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