The detailed information of tRNA gene sequence


Sequence ID>W1511608628
Genome IDLCEF01000004
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Collierbacteria bacterium GW2011_GWA1_42_60 bacterium GW2011_GWA1_42_60 [LCEF]
Start position on genome 28551
End posion on genome 28464
Amino Acid Ser
Anticodon ACT
Upstream region at tRNA start position 
ctccgcctca
tRNA gene sequence 
GGAGGGGTCGCATAGAGGCCTAGTGCGGCGGTTTACTAAACCGCTGTATCGCAAGATACC
ATGGGTTCGAATCCCATCCCCTCCGCCA
Downstream region at tRNA end position 
gttgggaaac
Secondary structure (Cloverleaf model)
>W1511608628	Ser	ACT
                   a      GCCA gttgggaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      A G A        C      | | | | |     G
    G       T A C G       A T G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TGTATCGCAAGATACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    A C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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