The detailed information of tRNA gene sequence


Sequence ID>W1511608793
Genome IDLCEK01000058
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Magasanikbacteria bacterium GW2011_GWE2_42_7 bacterium GW2011_GWE2_42_7 [LCEK]
Start position on genome 3232
End posion on genome 3156
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gaaaatgtgt
tRNA gene sequence 
CGGGGCGTAGCGCAGACCGGTAGCGCGTCTCCCTCGGACGGAGAAGGGCGTAGGTTCAAA
TCCTACCGTCCCGACCA
Downstream region at tRNA end position 
tagttcttct
Secondary structure (Cloverleaf model)
>W1511608793	Pro	CGG
                   t      ACCA tagttcttct
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     C A T C C     A
      A G A        A      | | | | |     A
    C       C G C G       G T A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        G     AGGGC
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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