The detailed information of tRNA gene sequence


Sequence ID>W1511609276
Genome IDLCFC01000006
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWA2_43_11 GW2011_GWA2_43_11 [LCFC]
Start position on genome 48583
End posion on genome 48668
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatgttttag
tRNA gene sequence 
GGAGGCGTCGCATAGTGGTCTAGTGCACCGTCTTGGAAAGACGGCAAGGTGAAAGCCTTC
GAGGGTTCAAATCCCTCCGCCTCCGCac
Downstream region at tRNA end position 
tgacaacctg
Secondary structure (Cloverleaf model)
>W1511609276	Ser	GGA
                   g      GCac tgacaacctg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        A     CAAGGTGAAAGCCTTC
                    C - G
                    C - G
                    G - C
                    T - A
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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