The detailed information of tRNA gene sequence


Sequence ID>W1511609341
Genome IDLCFE01000002
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWC1_43_11 GW2011_GWC1_43_11 [LCFE]
Start position on genome 25388
End posion on genome 25297
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cggcattctt
tRNA gene sequence 
GGAGAGTTGGCCGAGCGGCTTAAGGCAGCGGTTTGCTAAACCGCGGGGGTCTAAAAAACC
CCGCACAGGTTCGAATCCTGTACTCTCCGCCA
Downstream region at tRNA end position 
gcatgaattt
Secondary structure (Cloverleaf model)
>W1511609341	Ser	GCT
                   t      GCCA gcatgaattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T G T C C     A
      C G A        G      | | | | |     G
    G       G C C G       A C A G G     C
    G         | | |                 T T
    C       A G G C
      T T A        A     GGGGGTCTAAAAAACCCCGC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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